Protein-Ligand Screening

AMIX fully supports the analysis of protein-ligand binding combining interactive and automated tools. Effects of binding can be studied in spectra of labelled proteins or unlabelled ligands. Application to large series of spectra is possible.
 

Receptor based techniques

Peak tracing in a set of HSQC spectra
Peak tracing in a set of HSQC spectra
  • Automated HSQC comparison to detect spectral  changes
  • PCA analysis to differentiate origin of changes
  • Transfer of assignments between spectra
  • Peak tracing in titration series
  • Tabulated reports, e.g. with peak distances, volumes and line width
     
Automated analysis of combined STD, LOGSY, CPMG data
Automated analysis of combined STD, LOGSY, CPMG data

Ligand based techniques

  • Automated 1D matching techniques
  • SeeDs: combined 1D, STD, LOGSY and CPMG  analysis with and without competitor ligand
  • Setup of SeeDs
  • Automated execution of SeeDs
  • Combined data viewing
  • Tabulated reports